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Home  >Technical Resource  > Restriction Endonucleases Isoschizomers

Isoschizomers

Restriction endonucleases that recognize the same sequence are isoschizomers. The list below contains isoschizomers for commercially available restriction endonucleases. It also specifies which isoschizomer is available from New England Biolabs. Additional prototypes that are not commercially available are also listed.

All recognition sequences are written 5´ to 3´ using the single letter code nomenclature with the point of cleavage indicated by a "/".

Numbers in parentheses indicate point of cleavage for non-palindromic enzymes. For example, GGTCTC(1/5) indicates cleavage at:
5´ ...GGTCTCN/...3´
3´ ...CCAGAGNNNNN/...5´

Isoschizomers with alternative cleavage sites are indicated with a " ^ ".
Enzymes that are not currently commercially available are indicated with a " x ".

| A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | R | S | T | U | V | X | Z |

Enzyme Sequence NEB Enzyme catalogue # Sequence Other Isoschizomers
Aar I CACCTGC (4/8)        
Aas I GACNNNN/NNGTC Drd I R0530 GACNNNN/NNGTC Drd I, DseD I
Aat I AGG/CCT Stu I R0187 AGG/CCT Eco147 I, Pce I, SseB I, Stu I
Aat II GACGT/C Aat II R0117 GACGT/C Zra I^
    Zra I^ V0464 GAC/GTC  
Acc I GT/MKAC Acc I R0161 GT/MKAC Fbl I, Xmi I
Acc II CG/CG BstU I R0518 CG/CG Bsh1236 I, BstFN I, BstU I, Mvn I
Acc III T/CCGGA BspE I R0540 T/CCGGA BseA I, Bsp13 I, BspE I, Kpn2 I, Mro I
Acc16 I TGC/GCA Fsp I R0135 TGC/GCA Avi II, Fsp I, Nsb I
Acc36 I ACCTGC (4/8) BfuA I R0701 ACCTGC (4/8) BfuA I, BspM I, Bve I
    BspM I R0502 ACCTGC (4/8)  
Acc65 I G/GTACC Acc65 I R0599 G/GTACC Asp718 I, Kpn I^
    Kpn I^ R0142 GGTAC/C  
AccB1 I G/GYRCC Ban I R0118 G/GYRCC Ban I, BshN I, BspT107 I
AccB7 I CCANNNN/NTGG PflM I R0509 CCANNNN/NTGG PflB I, PflM I, Van91 I
AccBS I CCGCTC (-3/-3) BsrB I R0102 CCGCTC (-3/-3) BsrB I, Mbi I
Ace IIIx CAGCTC (7/11)        
Aci I CCGC (-3/-1) Aci I R0551 CCGC (-3/-1) Ssi I
Acl I AA/CGTT Acl I R0598 AA/CGTT Psp1406 I
AclW I GGATC (4/5) Alw I R0513 GGATC (4/5) Alw I, BspP I
Acs I R/AATTY Apo I R0566 R/AATTY Apo I, Xap I
Acu I CTGAAG (16/14) Acu I R0641 CTGAAG (16/14) Eco57 I
Acv I CAC/GTG Pml I R0532 CAC/GTG BbrP I, Eco72 I, PmaC I, Pml I, PspC I
Acy I GR/CGYC BsaH I R0556 GR/CGYC BsaH I, BstAC I, Hin1 I, Hsp92 I
Ade I CACNNN/GTG Dra III R0510 CACNNN/GTG Dra III
Afa I GT/AC Rsa I R0167 GT/AC Csp6 I^, Rsa I
Afe I AGC/GCT Afe I V0213 AGC/GCT Aor51H I, Eco47 III, Fun I
Afl II C/TTAAG Afl II R0520 C/TTAAG Bfr I, BspT I, Bst98 I, MspC I, Vha464 I
Afl III A/CRYGT Afl III R0541 A/CRYGT  
Age I A/CCGGT Age I R0552 A/CCGGT AsiA I, BshT I, CspA I, PinA I
Aha IIIx TTT/AAA Dra I R0129 TTT/AAA Dra I
Ahd I GACNNN/NNGTC Ahd I R0584 GACNNN/NNGTC AspE I, Dri I, Eam1105 I, EclHK I
Ahl I A/CTAGT Spe I R0133 A/CTAGT Bcu I, Spe I
Ajn I /CCWGG ^ R0168 CC/WGG BseB I^, BstN I^, BstO I^, Bst2U I^, EcoRI I, Mva I^, Psp6 I, PspG I
    PspG I R0611 /CCWGG  
Ale I CACNN/NNGTG Ale I R0734 CACNN/NNGTG Oli I
Alf I (10/12)GCANNNNNNTGC (12/10)        
Alo I (7/12) GAACNNNNNNTCC (12/7)        
Alu I AG/CT Alu I R0137 AG/CT  
Alw I GGATC (4/5) Alw I R0513 GGATC (4/5) AclW I, BspP I
Alw21 I GWGCW/C BsiHKA I R0570 GWGCW/C AspH I, Bbv12 I, BsiHKA I
Alw26 I GTCTC (1/5) BsmA I R0529 GTCTC (1/5) BsmA I, BsoMA I
Alw44 I G/TGCAC ApaL I R0507 G/TGCAC ApaL I, Vne I
AlwN I CAGNNN/CTG AlwN I R0514 CAGNNN/CTG Cai I
Ama87 I C/YCGRG Ava I R0152 C/YCGRG Ava I, BsiHKC I, BsoB I, Eco88 I, Nsp III
    BsoB I R0586 C/YCGRG  
Aor51H I AGC/GCT Afe I V0213 AGC/GCT Afe I, Eco47 III, Fun I
Apa I GGGCC/C Apa I R0114 GGGCC/C Bsp120 I^, PspOM I^
    PspOM I^ V0215 G/GGCCC  
ApaB Ix GCANNNNN/TGC BstAP I^ V0259 GCANNNN/NTGC BstAP I^
ApaL I G/TGCAC ApaL I R0507 G/TGCAC Alw44 I, Vne I
ApeK I G/CWGC ApeK I R0643 G/CWGC Tse I
    Tse I R0591 G/CWGC  
Apo I R/AATTY Apo I R0566 R/AATTY Acs I, Xap I
Asc I GG/CGCGCC Asc I R0558 GG/CGCGCC  
Ase I AT/TAAT Ase I R0526 AT/TAAT PshB I, Vsp I
AsiA I A/CCGGT Age I R0552 A/CCGGT Age I, BshT I, CspA I, PinA I
AsiS I GCGAT/CGC AsiS I R0630 GCGAT/CGC Sgf I
Asp I GACN/NNGTC PflF I R0595 GACN/NNGTC PflF I, Psy I, Tel I, Tth111 I
    Tth111 I R0185 GACN/NNGTC  
Asp700 I GAANN/NNTTC Xmn I R0194 GAANN/NNTTC MroX I, Pdm I, Xmn I
Asp718 I G/GTACC Acc65 I R0599 G/GTACC Acc65 I, Kpn I^
    Kpn I^ R0142 GGTAC/C  
AspA2 I C/CTAGG Avr II R0174 C/CTAGG Avr II, Bln I, XmaJ I
AspE I GACNNN/NNGTC Ahd I R0584 GACNNN/NNGTC Ahd I, Dri I, Eam1105 I, EclHK I
AspH I GWGCW/C BsiHKA I R0570 GWGCW/C Alw21 I, Bbv12 I, BsiHKA I
AspLE I GCG/C Hha I R0139 GCG/C BstHH I, Cfo I, Hha I, Hin6 I^, HinP1 I^, HspA I^
    HinP1 I^ R0124 G/CGC  
AspS9 I G/GNCC Sau96 I R0165 G/GNCC Cfr13 I, PspP I, Sau96 I
Asu Ix G/GNCC Sau96 I R0165 G/GNCC AspS9 I, Cfr13 I, PspP I, Sau96 I
Asu II TT/CGAA BstB I R0519 TT/CGAA Bpu14 I, Bsp119 I, BspT104 I, BstB I, Csp45 I, NspV,Sfu I
AsuC2 I CC/SGG Nci I R0196 CC/SGG Bcn I, Nci I
AsuHP I GGTGA (8/7) Hph I R0158 GGTGA (8/7) Hph I
AsuNH I G/CTAGC Bmt I^ V0458 GCTAG/C Nhe I, Bmt I^
    Nhe I R0131 G/CTAGC  
Ava I C/YCGRG Ava I R0152 C/YCGRG Ama87 I, BsiHKC I, BsoB I, Eco88 I, Nsp III
    BsoB I R0586 C/YCGRG  
Ava II G/GWCC AvaI I R0153 G/GWCC Bme18 I, Eco47 I, Sin I, VpaK11B I
Ava IIIx ATGCAT BfrB I R0625 ATG/CAT BfrB I, EcoT22 I^, Mph1103 I^, Nsi I^, Zsp2 I^
    Nsi I^ R0127 ATGCA/T  
Avi II TGC/GCA Fsp I R0135 TGC/GCA Acc16 I, Fsp I, Nsb I
Avr II C/CTAGG Avr II R0174 C/CTAGG AspA2 I, Bln I, XmaJ I
Axy I CC/TNAGG Bsu36 I R0524 CC/TNAGG Bse21 I, Bsu36 I, Eco81 I
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Bae I (10/15) ACNNNNGTAYC (12/7) Bae I R0613 (10/15) ACNNNNGTAYC (12/7)  
Bal I TGG/CCA Msc I R0534 TGG/CCA Mls I, MluN I, Msc I, Msp20 I
BamH I G/GATCC BamH I R0136 G/GATCC  
Ban I G/GYRCC Ban I R0118 G/GYRCC AccB1 I, BshN I, BspT107 I
Ban II GRGCY/C Ban II R0119 GRGCY/C Eco24 I, EcoT38 I, FriO I
Ban III AT/CGAT BspD I R0557 AT/CGAT Bsa29 I, BseC I, Bsp106 I, BspD I, BspX I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
Bbe I GGCGC/C Kas I^ R0544 G/GCGCC Ege I^^, Ehe I^^, Kas I^, Mly113 I^^^, Nar I^^^, Sfo I^^
    Nar I^^^ R0191 GG/CGCC  
    Sfo I^^ R0606 GGC/GCC  
BbrP I CAC/GTG Pml I R0532 CAC/GTG Acv I, Eco72 I, PmaC I, Pml I
Bbs I GAAGAC (2/6) Bbs I R0539 GAAGAC (2/6) Bpi I, BpuA I, BstV2 I
Bbu I GCATG/C Sph I R0182 GCATG/C Pae I, SpaH I, Sph I
Bbv I GCAGC (8/12) Bbv I R0173 GCAGC (8/12) BseX I, BstV1 I
Bbv IIx GAAGAC (2/6) Bbs I R0539 GAAGAC (2/6) Bbs I, Bpi I, BpuA I, BstV2 I
Bbv12 I GWGCW/C BsiHKA I R0570 GWGCW/C Alw21 I, AspH I, BsiHKA I
BbvC I CCTCAGC (-5/-2) BbvC I R0601 CCTCAGC (-5/-2)  
Bcc I CCATC(4/5) Bcc I R0704 CCATC(4/5)  
Bce83 Ix CTTGAG (16/14) BpuE I R0633 CTTGAG (16/14) BpuE I
BceA I ACGGC (12/14) BceA I R0623 ACGGC (12/14)  
Bcef Ix ACGGC (12/13) BceA I^ R0623 ACGGC (12/14) BceA I^
Bcg I (10/12) CGANNNNNNTGC (12/10) Bcg I R0545 (10/12) CGANNNNNNTGC (12/10)  
BciV I GTATCC (6/5) BciV I R0596 GTATCC (6/5) Bfu I
Bcl I T/GATCA Bcl I R0160 T/GATCA Fba I, Ksp22 I
Bcn I CC/SGG Nci I R0196 CC/SGG AsuC2 I, Nci I
Bcu I A/CTAGT Spe I R0133 A/CTAGT Ahl I, Spe I
Bet Ix W/CCGGW BsaW I R0567 W/CCGGW BsaW I
Bfa I C/TAG Bfa I R0568 C/TAG FspB I, Mae I, Xsp I
Bfi I ACTGGG (5/4) Bmr I R0600 ACTGGG (5/4) Bmr I
Bfm I C/TRYAG Sfc I R0561 C/TRYAG BstSF I, Sfc I
Bfr I C/TTAAG Afl II R0520 C/TTAAG Afl II, BspT I, Bst98 I, MspC I, Vha464 I
BfrB I ATGCA/T Nsi I R0127 ATGCA/T EcoT22 I^, Mph1103 I^, Nsi I^, Zsp2 I^
Bfu I GTATCC (6/5) BciV I R0596 GTATCC (6/5) BciV I
BfuA I ACCTGC (4/8) BfuA I R0701 ACCTGC (4/8) Acc36 I, BspM I, Bve I
    BspM I R0502 ACCTGC (4/8)  
BfuC I /GATC BfuC I R0636 /GATC Bsp143 I, BstKT I^, BstMB I, Dpn II, Kzo9 I, Mbo I, Nde II, Sau3A I
    Dpn II R0543 /GATC  
    Mbo I R0147 /GATC  
    Sau3A I R0169 /GATC  
Bgl I GCCNNNN/NGGC Bgl I R0143 GCCNNNN/NGGC  
Bgl II A/GATCT Bgl II R0144 A/GATCT  
Bin Ix GGATC (4/5) Alw I R0513 GGATC (4/5) AclW I, Alw I, BspP I
Bln I C/CTAGG Avr II R0174 C/CTAGG AspA2 I, Avr II, XmaJ I
Blp I GC/TNAGC Blp I R0585 GC/TNAGC Bpu1102 I, Bsp1720 I, Cel II
Bme18 I G/GWCC Ava II R0153 G/GWCC Ava II, Eco47 I, Sin I, VpaK11B I
Bme1390 I CC/NGG BssK I^ R0592 /CCNGG BssK I^, BstSC I^, MspR9 I, ScrF I, StyD4 I^
    ScrF I R0110 CC/NGG  
    StyD4 I^ R0638 /CCNGG  
Bme1580 I GKGCM/C Bme1580 I R0702 GKGCM/C BseS I
Bmg Ix GKGCCC        
BmgB I CACGTC (-3/-3) BmgB I R0628 CACGTC (-3/-3) Btr I
Bmr I ACTGGG (5/4) Bmr I R0600 ACTGGG (5/4) Bfi I
Bmt I GCTAG/C Bmt I V0458 GCTAG/C AsuNH I^, Nhe I^
    Nhe I^ R0131 G/CTAGC  
Bmy I GDGCH/C Bsp1286 I R0120 GDGCH/C Bsp1286 I, Mhl I, Sdu I
Box I GACNN/NNGTC PshA I R0593 GACNN/NNGTC BstPA I, PshA I
Bpi I GAAGAC (2/6) Bbs I R0539 GAAGAC (2/6) Bbs I, BpuA I, BstV2 I
Bpl I (8/13) GAGNNNNNCTC (13/8)        
Bpm I CTGGAG (16/14) Bpm I R0565 CTGGAG (16/14) Gsu I
Bpu10 I CCTNAGC (-5/-2) Bpu10 I V0149 CCTNAGC (-5/-2)  
Bpu14 I TT/CGAA BstB I R0519 TT/CGAA Asu II, Bsp119 I, BspT104 I, BstB I, Csp45 I, Nsp V,Sfu I
Bpu1102 I GC/TNAGC Blp I R0585 GC/TNAGC Blp I, Bsp1720 I, Cel II
BpuA I GAAGAC (2/6) Bbs I R0539 GAAGAC (2/6) Bbs I, Bpi I, BstV2 I
BpuE I CTTGAG (16/14) BpuE I R0633 CTTGAG (16/14)  
Bsa I GGTCTC (1/5) Bsa I R0535 GGTCTC (1/5) Bso31 I, BspTN I, Eco31 I
Bsa29 I AT/CGAT BspD I R0557 AT/CGAT Ban III, BseC I, Bsp106 I, BspD I, BspX I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
BsaA I YAC/GTR BsaA I R0531 YAC/GTR BstBA I
BsaB I GATNN/NNATC BsaB I R0537 GATNN/NNATC Bse8 I, BseJ I, Mam I
BsaH I GR/CGYC BsaH I R0556 GR/CGYC Acy I, BstAC I, Hin1 I, Hsp92 I
BsaJ I C/CNNGG BsaJ I R0536 C/CNNGG BseD I, BssEC I
BsaM I GAATGC (1/-1) Bsm I R0134 GAATGC (1/-1) Bsm I, Mva1269 I, Pct I
BsaW I W/CCGGW BsaW I R0567 W/CCGGW  
BsaX I (9/12) ACNNNNNCTCC (10/7) BsaX I R0609 (9/12) ACNNNNNCTCC (10/7)  
Bsb Ix CAACAC        
Bsc4 I CCNNNNN/NNGG Bsl I R0555 CCNNNNN/NNGG BseL I, BsiY I, Bsl I
BscG Ix CCCGT        
Bse1 I ACTGG (1/-1) Bsr I R0527 ACTGG (1/-1) BseN I, Bsr I, BsrS I
Bse8 I GATNN/NNATC BsaB I R0537 GATNN/NNATC BsaB I, BseJ I, Mam I
Bse21 I CC/TNAGG Bsu36 I R0524 CC/TNAGG Axy I, Bsu36 I, Eco81 I
Bse118 I R/CCGGY BsrF I R0562 R/CCGGY BsrF I, BssA I, Cfr10 I
BseA I T/CCGGA BspE I R0540 T/CCGGA Acc III, Bsp13 I, BspE I, Kpn2 I, Mro I
BseB I CC/WGG BstN I R0168 CC/WGG Ajn I^, BstN I, BstO I, Bst2U I, EcoR II^, Mva I, Psp6 I^, PspG I^
    PspG I^ R0611 /CCWGG  
BseC I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, Bsp106 I, BspD I, BspX I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
BseD I C/CNNGG BsaJ I R0536 C/CNNGG BsaJ I, BssEC I
Bse3D I GCAATG (2/0) BsrD I R0574 GCAATG (2/0) BseM I, BsrD I
BseG I GGATG (2/0) BstF5 I V0031 GGATG (2/0) BstF5 I, Fok I^
    Fok I^ R0109 GGATG (9/13)  
BseJ I GATNN/NNATC BsaB I R0537 GATNN/NNATC BsaB I, Bse8 I, Mam I
BseL I CCNNNNN/NNGG Bsl I R0555 CCNNNNN/NNGG Bsc4 I, BsiY I, Bsl I
BseM I GCAATG (2/0) BsrD I R0574 GCAATG (2/0) Bse3D I, BsrD I
BseM II CTCAG (10/8) BspCN I^ R0624 CTCAG (9/7) BspCN I^
BseN I ACTGG (1/-1) Bsr I R0527 ACTGG (1/-1) Bse1 I, Bsr I, BsrS I
BseP I G/CGCGC BssH II R0199 G/CGCGC BssH II, Pau I
BseR I GAGGAG (10/8) BseR I R0581 GAGGAG (10/8)  
BseS I GKGCM/C Bme1580 I R0702 GKGCM/C Bme1580 I
BseX I GCAGC (8/12) Bbv I R0173 GCAGC (8/12) Bbv I, BstV1 I
BseX3 I C/GGCCG Eag I R0505 C/GGCCG BstZ I, Eag I, EclX I, Eco52 I
BseY I CCCAGC (-5/-1) BseY I R0635 CCCAGC (-5/-1)  
Bsg I GTGCAG (16/14) Bsg I R0559 GTGCAG (16/14)  
Bsh1236 I CG/CG BstU I R0518 CG/CG Acc II, BstFN I, BstU I, Mvn I
Bsh1285 I CGRY/CG BsiE I R0554 CGRY/CG BsiE I, BstMC I
BshF I GG/CC Hae III R0108 GG/CC BspAN I, BsuR I, Hae III, Pal I, Pho I
    Pho I R0705 GG/CC  
BshN I G/GYRCC Ban I R0118 G/GYRCC AccB1 I, Ban I, BspT107 I
BshT I A/CCGGT Age I R0552 A/CCGGT Age I, AsiA I, CspA I, PinA I
Bsi Ix CACGAG (-5/-1) BssS I R0587 CACGAG (-5/-1) BssS I, Bst2B I
BsiE I CGRY/CG BsiE I R0554 CGRY/CG Bsh1285 I, BstMC I
BsiHKA I GWGCW/C BsiHKA I R0570 GWGCW/C Alw21 I, AspH I, Bbv12 I
BsiHKC I C/YCGRG Ava I R0152 C/YCGRG Ama87 I, Ava I, BsoB I, Eco88 I, Nsp III
    BsoB I R0586 C/YCGRG  
BsiS I C/CGG Hpa II R0171 C/CGG Hap II, Hpa II, Msp I
    Msp I R0106 C/CGG  
BsiW I C/GTACG BsiW I R0553 C/GTACG Pfl23 II, PspL I, Sun I
    Cla I R0197 AT/CGAT  
BsiY I CCNNNNN/NNGG Bsl I R0555 CCNNNNN/NNGG Bsc4 I, BseL I, Bsl I
Bsl I CCNNNNN/NNGG Bsl I R0555 CCNNNNN/NNGG Bsc4 I, BseL I, BsiY I
BslF I (11/15)GGGAC(10/14) BsmF I R0572 GGGAC(10/14) BsmF I
Bsm I GAATGC (1/-1) Bsm I R0134 GAATGC (1/-1) BsaM I, Mva1269 I, Pct I
BsmA I GTCTC (1/5) BsmA I R0529 GTCTC (1/5) Alw26 I, BsoMA I
BsmB I CGTCTC (1/5) BsmB I R0580 CGTCTC (1/5) Esp3 I
BsmF I GGGAC (10/14) BsmF I R0572 GGGAC (10/14) BslF I
Bso31 I GGTCTC (1/5) Bsa I R0535 GGTCTC (1/5) Bsa I, BspTN I, Eco31 I
BsoB I C/YCGRG Ava I R0152 C/YCGRG Ama87 I, Ava I, BsiHKC I, Eco88 I, Nsp III
    BsoB I R0586 C/YCGRG  
BsoMA I GTCTC (1/5) BsmA I R0529 GTCTC (1/5) Alw26 I, BsmA I
Bsp13 I T/CCGGA BspE I R0540 T/CCGGA Acc III, BseA I, BspE I, Kpn2 I, Mro I
Bsp19 I C/CATGG Nco I R0193 C/CATGG Nco I
Bsp24 Ix (8/13) GACNNNNNNTGG (12/7)        
Bsp68 I TCG/CGA Nru I R0192 TCG/CGA Nru I
Bsp106 I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, BspD I, BspX I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
Bsp119 I TT/CGAA BstB I R0519 TT/CGAA Asu II, Bpu14 I, BspT104 I, BstB I, Csp45 I, NspV,Sfu I
Bsp120 I G/GGCCC Apa I^ R0114 GGGCC/C Apa I^, PspOM I
    PspOM I V0215 G/GGCCC  
Bsp143 I /GATC BfuC I R0636 /GATC BfuC I, BstKT I^, BstMB I, Dpn II, Kzo9 I, Mbo I, Nde II, Sau3A I
    Dpn II R0543 /GATC  
    Mbo I R0147 /GATC  
    Sau3A I R0169 /GATC  
Bsp143 II RGCGC/Y Hae II R0107 RGCGC/Y BstH2 I, Hae II
Bsp1286 I GDGCH/C Bsp1286 I R0120 GDGCH/C Bmy I, Mhl I, Sdu I
Bsp1407 I T/GTACA BsrG I R0575 T/GTACA BsrG I, BstAU I, SspB I
Bsp1720 I GC/TNAGC Blp I R0585 GC/TNAGC Blp I, Bpu1102 I, Cel II
BspAN I GG/CC Hae III R0108 GG/CC BshF I, BsuR I, Hae III, Pal I, Pho I
    Pho I R0705 GG/CC  
BspC I CGAT/CG Pvu I R0150 CGAT/CG Ple19 I, Pvu I
BspCN I CTCAG (9/7) BspCN I R0624 CTCAG (9/7) BseM II^
BspD I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, Bsp106 I, BspX I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
BspE I T/CCGGA BspE I R0540 T/CCGGA Acc III, BseA I, Bsp13 I, Kpn2 I, Mro I
BspG Ix CTGGAC        
BspH I T/CATGA BspH I R0517 T/CATGA Pag I, Rca I
BspL I GGN/NCC Nla IV R0126 GGN/NCC Nla IV, PspN4 I
BspLU11 I A/CATGT Pci I V0275 A/CATGT Pci I
BspM I ACCTGC (4/8) BfuA I R0701 ACCTGC (4/8) Acc36 I, BfuA I, Bve I
    BspM I R0502 ACCTGC (4/8)  
BspM IIx T/CCGGA BspE I R0540 T/CCGGA Acc III, BseA I, Bsp13 I, BspE I, Kpn2 I, Mro I
BspMA I CTGCA/G Pst I R0140 CTGCA/G Pst I
BspNC Ix CCAGA        
BspP I GGATC (4/5) Alw I R0513 GGATC (4/5) AclW I, Alw I
BspT I C/TTAAG Afl II R0520 C/TTAAG Afl II, Bfr I, Bst98 I, MspC I, Vha464 I
BspT104 I TT/CGAA BstB I R0519 TT/CGAA Asu II, Bpu14 I, Bsp119 I, BstB I, Csp45 I, NspV,Sfu I
BspT107 I G/GYRCC Ban I R0118 G/GYRCC AccB1 I, Ban I, BshN I
BspTN I GGTCTC (1/5) Bsa I R0535 GGTCTC (1/5) Bsa I, Bso31 I, Eco31 I
BspX I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, Bsp106 I, BspD I, Bsu15 I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
Bsr I ACTGG (1/-1) Bsr I R0527 ACTGG (1/-1) Bse1 I, BseN I, BsrS I
BsrB I CCGCTC (-3/-3) BsrB I R0102 CCGCTC (-3/-3) AccBS I, Mbi I
BsrD I GCAATG (2/0) BsrD I R0574 GCAATG (2/0) Bse3D I, BseM I
BsrF I R/CCGGY BsrF I R0562 R/CCGGY Bse118 I, BssA I, Cfr10 I
BsrG I T/GTACA BsrG I R0575 T/GTACA Bsp1407 I, BstAU I, SspB I
BsrS I ACTGG (1/-1) Bsr I R0527 ACTGG (1/-1) Bse1 I, BseN I, Bsr I
BssA I R/CCGGY BsrF I R0562 R/CCGGY Bse118 I, BsrF I, Cfr10 I
BssEC I C/CNNGG BsaJ I R0536 C/CNNGG BsaJ I, BseD I
BssH I C/TCGAG PaeR7 I R0177 C/TCGAG PaeR7 I, Sfr274 I, Sla I, Tli I, Xho I
    Tli I R0612 C/TCGAG  
    Xho I R0146 C/TCGAG  
BssH II G/CGCGC BssH II R0199 G/CGCGC BseP I, Pau I
BssK I /CCNGG BssK I R0592 /CCNGG Bme1390 I^, BstSC I, MspR9 I^, ScrF I^, StyD4 I
    ScrF I^ R0110 CC/NGG  
    StyD4 I R0638 /CCNGG  
BssNA I GTA/TAC BstZ17 I R0594 GTA/TAC Bst1107 I, BstZ17 I
BssS I CACGAG (-5/-1) BssS I R0587 CACGAG (-5/-1) Bst2B I
BssT1 I C/CWWGG Sty I R0500 C/CWWGG Eco130 I, EcoT14 I, Erh I, Sty I
Bst6 I CTCTTC (1/4) Ear I R0528 CTCTTC (1/4) Eam1104 I, Ear I, Ksp632 I
Bst98 I C/TTAAG Afl II R0520 C/TTAAG Afl II, Bfr I, BspT I, MspC I, Vha464 I
Bst1107 I GTA/TAC BstZ17 I R0594 GTA/TAC BssNA I, BstZ17 I
BstAC I GR/CGYC BsaH I R0556 GR/CGYC Acy I, BsaH I, Hin1 I, Hsp92 I
BstAP I GCANNNN/NTGC BstAP I V0259 GCANNNN/NTGC  
BstB I TT/CGAA BstB I R0519 TT/CGAA Asu II, Bpu14 I, Bsp119 I, BspT104 I, Csp45 I, NspV,Sfu I
Bst2B I CACGAG (-5/-1) BssS I R0587 CACGAG (-5/-1) BssS I
BstBA I YAC/GTR BsaA I R0531 YAC/GTR BsaA I
Bst4C I ACN/GT HpyCH4 III R0618 ACN/GT HpyCH4 III, Taa I
BstC8 I GCN/NGC Cac8 I R0579 GCN/NGC Cac8 I
BstDE I C/TNAG Dde I R0175 C/TNAG Dde I
BstDS I C/CRYGG Btg I R0608 C/CRYGG Btg I
BstE II G/GTNACC BstE II R0162 G/GTNACC BstP I, Eco91 I, EcoO65 I, PspE I
BstEN I CCTNN/NNNAGG EcoN I R0521 CCTNN/NNNAGG EcoN I, Xag I
BstF5 I GGATG (2/0) BstF5 I V0031 GGATG (2/0) BseG I, Fok I^
    Fok I^ R0109 GGATG (9/13)  
BstFN I CG/CG BstU I R0518 CG/CG AccI I, Bsh1236 I, BstU I, Mvn I
BstH2 I RGCGC/Y Hae II R0107 RGCGC/Y Bsp143 II, Hae II
BstHH I GCG/C Hha I R0139 GCG/C AspLE I, Cfo I, Hha I, Hin6 I^, HinP1 I^, HspA I^
    HinP1 I^ R0124 G/CGC  
BstKT I GAT/C BfuC I^ R0636 /GATC BfuC I^, Bsp143 I^, BstMB I^, Dpn II^, Kzo9 I^, Mbo I^, NdeI I^, Sau3A I^
    Dpn II^ R0543 /GATC  
    Mbo I^ R0147 /GATC  
    Sau3A I^ R0169 /GATC  
BstMB I /GATC BfuC I  R0636 /GATC BfuC I, Bsp143 I, BstKT I^, Dpn II, Kzo9 I, Mbo I, Nde II, Sau3A I
    Dpn II R0543 /GATC  
    Mbo I R0147 /GATC  
    Sau3A I R0169 /GATC  
BstMC I CGRY/CG BsiE I R0554 CGRY/CG Bsh1285 I, BsiE I
BstMW I GCNNNNN/NNGC Mwo I R0573 GCNNNNN/NNGC HpyF10V I, Mwo I
BstN I CC/WGG BstN I R0168 CC/WGG Ajn I^, BseB I, BstO I, Bst2U I, EcoR II^, Mva I, Psp6 I^, PspG I^
    PspG I^ R0611 /CCWGG  
BstNS I RCATG/Y Nsp I R0602 RCATG/Y Nsp I, Xce I
BstO I CC/WGG BstN I R0168 CC/WGG Ajn I^, BseB I, BstN I, Bst2U I, EcoR II^, Mva I, PspG I^
    PspG I^ R0611 /CCWGG  
BstP I G/GTNACC BstE II R0162 G/GTNACC BstE II, Eco91 I, EcoO65 I, PspE I
BstPA I GACNN/NNGTC PshA I R0593 GACNN/NNGTC Box I, PshA I
BstSC I /CCNGG BssK I R0592 /CCNGG Bme1390 I^, BssK I, MspR9 I^, ScrF I^, StyD4 I
    ScrF I^ R0110 CC/NGG  
    StyD4 I R0638 /CCNGG  
BstSF I C/TRYAG Sfc I R0561 C/TRYAG Bfm I, Sfc I
BstSN I TAC/GTA SnaB I R0130 TAC/GTA Eco105 I, SnaB I
BstU I CG/CG BstU I R0518 CG/CG Acc II, Bsh1236 I, BstFN I, Mvn I
Bst2U I CC/WGG BstN I R0168 CC/WGG Ajn I^, BseB I, BstN I, BstO I, EcoRI I^, Mva I, Psp6 I^, PspG I^
    PspG I^ R0611 /CCWGG  
BstV1 I GCAGC (8/12) Bbv I R0173 GCAGC (8/12) Bbv I, BseX I
BstV2 I GAAGAC (2/6) Bbs I R0539 GAAGAC (2/6) Bbs I, Bpi I, BpuA I
BstX I CCANNNNN/NTGG BstX I R0113 CCANNNNN/NTGG  
BstX2 I R/GATCY BstY I R0523 R/GATCY BstY I, Mfl I, Psu I, Xho II
BstY I R/GATCY BstY I R0523 R/GATCY BstX2 I, Mfl I, Psu I, Xho II
BstZ I C/GGCCG Eag I R0505 C/GGCCG BseX3 I, Eag I, EclX I, Eco52 I
BstZ17 I GTA/TAC BstZ17 I R0594 GTA/TAC BssNA I, Bst1107 I
Bsu15 I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, Bsp106 I, BspD I, BspX I, BsuTU I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
Bsu36 I CC/TNAGG Bsu36 I R0524 CC/TNAGG Axy I, Bse21 I, Eco81 I
BsuR I GG/CC Hae III R0108 GG/CC BshF I, BspAN I, Hae III, Pal I, Pho I
    Pho I R0705 GG/CC  
BsuTU I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, Bsp106 I, BspD I, BspX I, Bsu15 I, Cla I, Zho I
    Cla I R0197 AT/CGAT  
Btg I C/CRYGG Btg I R0608 C/CRYGG BstDS I
BtgZ I GCGATG(10/14) BtgZ I R0703 GCGATG(10/14)  
Btr I CACGTC (-3/-3) BmgB I R0628 CACGTC (-3/-3) BmgB I
Bts I GCAGTG (2/0) Bts I R0614 GCAGTG (2/0)  
Bve I ACCTGC(4/8) BfuA I R0701 ACCTGC(4/8) Acc36 I, BfuA I, BspM I
    BspM I R0502 ACCTGC(4/8)  
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Cac8 I GCN/NGC Cac8 I R0579 GCN/NGC BstC8 I
Cai I CAGNNN/CTG AlwN I R0514 CAGNNN/CTG AlwN I
Cau IIx CC/SGG Nci I R0196 CC/SGG AsuC2 I, Bcn I, Nci I
CciN I GC/GGCCGC Not I R0189 GC/GGCCGC Not I
Cdi Ix CATCG(-1/-1)        
Cel II GC/TNAGC Blp I R0585 GC/TNAGC Blp I, Bpu1102 I, Bsp1720 I
Cfo I GCG/C Hha I R0139 GCG/C AspLE I, BstHH I, Hha I, Hin6 I^, HinP1 I^, HspA I^
    HinP1 I^ R0124 G/CGC  
Cfr I Y/GGCCR Eae I R0508 Y/GGCCR Eae I
Cfr9 I C/CCGGG Sma I^ R0141 CCC/GGG PspA I, Sma I^, Xma I, XmaC I
    Xma I R0180 C/CCGGG  
Cfr10 I R/CCGGY BsrF I R0562 R/CCGGY Bse118 I, BsrF I, BssA I
Cfr13 I G/GNCC Sau96 I R0165 G/GNCC AspS9 I, PspP I, Sau96 I
Cfr42 I CCGC/GG Sac II R0157 CCGC/GG Ksp I, Sac II, Sfr303 I, SgrB I
Cje Ix (8/14) CCANNNNNNGT (15/9)        
CjeP Ix (7/13) CCANNNNNNNTC (14/8)        
Cla I AT/CGAT BspD I R0557 AT/CGAT Ban III, Bsa29 I, BseC I, Bsp106 I, BspD I, BspX I, Bsu15 I, BsuTU I, Zho I
    Cla I R0197 AT/CGAT  
Cpo I CG/GWCCG Rsr II R0501 CG/GWCCG Csp I, Rsr II, Rsr2 I
Csp I CG/GWCCG Rsr II R0501 CG/GWCCG Cpo I, Rsr II, Rsr2 I
Csp6 I G/TAC Rsa I^ R0167 GT/AC Afa I^, Rsa I^
Csp45 I TT/CGAA BstB I R0519 TT/CGAA Asu II, Bpu14 I, Bsp119 I, BspT104 I, BstB I, NspV,Sfu I
CspA I A/CCGGT Age I R0552 A/CCGGT Age I, AsiA I, BshT I, PinA I
CspC I (11/13)CAANNNNNGTGG(12/10) CspC I R0645 (11/13)CAANNNNNGTGG(12/10)  
CstM Ix AAGGAG(20/18)        
CviA II C/ATG CviA II R0640 C/ATG Fat I^, Hsp92 II^^, Nla III^^
    ^ V0156 /CATG  
    ^ R0125 CATG/  
CviJ I RG/CY       CviT I
CviR I TG/CA HpyCH4 V R0620 TG/CA HpyCH4 V
CviT I RG/CY       CviJ I
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Dde I C/TNAG Dde I R0175 C/TNAG BstDE I
Dpn I GA/TC Dpn I R0176 GA/TC  
Dpn II /GATC BfuC I R0636 /GATC BfuC I, Bsp143 I, BstKT I^, BstMB I, Kzo9 I, Mbo I, Nde II, Sau3A I
    Dpn II R0543 /GATC  
    Mbo I R0147 /GATC  
    Sau3A I R0169 /GATC  
Dra I TTT/AAA Dra I R0129 TTT/AAA  
Dra II RG/GNCCY EcoO109 I R0503 RG/GNCCY EcoO109 I
Dra III CACNNN/GTG Dra III R0510 CACNNN/GTG Ade I
Drd I GACNNNN/NNGTC Drd I R0530 GACNNNN/NNGTC Aas I, DseD I
Drd IIx GAACCA        
Dri I GACNNN/NNGTC Ahd I R0584